PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.05G034900.2.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family BES1
Protein Properties Length: 702aa    MW: 79132.2 Da    PI: 5.8598
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.05G034900.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822143.12.5e-44762181136
               DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl....eeaeaagssa 86 
                          gg++r+++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++  ++ +     +++ a ss+
  Manes.05G034900.2.p  76 GGARRSRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRTQNPrplgGTSAGAISSS 165
                          6899*****************************************************************955554435563333333333 PP

               DUF822  87 s..aspesslq.sslkssalaspvesysaspksssfpspssldsislasaasl 136
                          +  +s+++++  ++ +s   +  ve  s+++k + +p+ps +d  ++++++++
  Manes.05G034900.2.p 166 ThlVSQQTPSAsLRGVSPGYRPSVEYNSSRLKGVFVPAPSPYDLPTSTQSQNS 218
                          33577777766678889999999999999**************9877655433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.2E-3878216IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514453.26E-180258697IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.801.5E-199261695IPR013781Glycoside hydrolase, catalytic domain
PfamPF013734.3E-104267687IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.1E-69298312IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.1E-69319337IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.1E-69341362IPR001554Glycoside hydrolase, family 14
PRINTSPR008421.4E-7424433IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007502.1E-69434456IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.1E-69507526IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.1E-69541557IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.1E-69558569IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.1E-69576599IPR001554Glycoside hydrolase, family 14
PRINTSPR008421.4E-7579589IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007502.1E-69616638IPR001554Glycoside hydrolase, family 14
PRINTSPR008421.4E-7667681IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008421.4E-7682696IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 702 aa     Download sequence    Send to blast
MATDMQKLIG TSEEDDEEEM DMDVKEEDDE DENREKHIAR QVMVGIDGGM ASNSSNNQFL  60
HHQHIQDQVS TLGGGGGARR SRPLEEKERT KLRERHRRAI TARILAGLRR HGNYNLRVRA  120
DINDVIAALA REAGWVVLPD GTTFPSRTQN PRPLGGTSAG AISSSTHLVS QQTPSASLRG  180
VSPGYRPSVE YNSSRLKGVF VPAPSPYDLP TSTQSQNSAM MGDGGEQTES HPLISGSLDN  240
VNDKQIVDMS PKLLERDFTG SSYVPVYVML PLGVINMKCE LADPDGLLKQ LRVLKSASVD  300
GVMVDCWWGI VEAHAPQEYN WNGYKRLFQM VHELKLKLQV VMSFHECGGN FGDDVCIPLP  360
HWIAEIGRSN PDIFFTDREG RRNPECLSWG IDRERVLRGR TALEVYFDYM RSFRVEFDEF  420
FHDDLISMVE IGLGPCGELR YPSCPVKHGW RYPGIGEFQC YDQYLLKSLK KTAEARGHPC  480
WARGPENAGT YNTQPHETGF FCDGGDYDVY YGRFFLNWYS RILVEHGDRV LSLAKLAFEG  540
TQISAKLSGI HWWYKTASHA AELTAGYYNP CNRDGYAAIA VMLKKHGATL NISYSELRML  600
DQQVDFSDAL SDPDGLLWQV LNAAWDVDIP IASENALPCH DRITYNKILD NAKPLNNPDG  660
RHFWSFTYLR LSPLLMDRQN FMEFERFVKK MHGEAVLDLQ V*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wdr_A1e-15726269410444Beta-amylase
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.05G034900.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021613139.10.0beta-amylase 7 isoform X1
RefseqXP_021613140.10.0beta-amylase 7 isoform X1
RefseqXP_021613141.10.0beta-amylase 7 isoform X1
RefseqXP_021613142.10.0beta-amylase 7 isoform X1
RefseqXP_021613143.10.0beta-amylase 7 isoform X1
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A251KSS80.0A0A251KSS8_MANES; Beta-amylase
STRINGcassava4.1_002728m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]