![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Manes.05G034900.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
||||||||
Family | BES1 | ||||||||
Protein Properties | Length: 702aa MW: 79132.2 Da PI: 5.8598 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 143.1 | 2.5e-44 | 76 | 218 | 1 | 136 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl....eeaeaagssa 86 gg++r+++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++ ++ + +++ a ss+ Manes.05G034900.1.p 76 GGARRSRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRTQNPrplgGTSAGAISSS 165 6899*****************************************************************955554435563333333333 PP DUF822 87 s..aspesslq.sslkssalaspvesysaspksssfpspssldsislasaasl 136 + +s+++++ ++ +s + ve s+++k + +p+ps +d ++++++++ Manes.05G034900.1.p 166 ThlVSQQTPSAsLRGVSPGYRPSVEYNSSRLKGVFVPAPSPYDLPTSTQSQNS 218 33577777766678889999999999999**************9877655433 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.2E-38 | 78 | 216 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
SuperFamily | SSF51445 | 3.26E-180 | 258 | 697 | IPR017853 | Glycoside hydrolase superfamily |
Gene3D | G3DSA:3.20.20.80 | 1.5E-199 | 261 | 695 | IPR013781 | Glycoside hydrolase, catalytic domain |
Pfam | PF01373 | 4.3E-104 | 267 | 687 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 2.1E-69 | 298 | 312 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 2.1E-69 | 319 | 337 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 2.1E-69 | 341 | 362 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00842 | 1.4E-7 | 424 | 433 | IPR001371 | Glycoside hydrolase, family 14B, plant |
PRINTS | PR00750 | 2.1E-69 | 434 | 456 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 2.1E-69 | 507 | 526 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 2.1E-69 | 541 | 557 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 2.1E-69 | 558 | 569 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 2.1E-69 | 576 | 599 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00842 | 1.4E-7 | 579 | 589 | IPR001371 | Glycoside hydrolase, family 14B, plant |
PRINTS | PR00750 | 2.1E-69 | 616 | 638 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00842 | 1.4E-7 | 667 | 681 | IPR001371 | Glycoside hydrolase, family 14B, plant |
PRINTS | PR00842 | 1.4E-7 | 682 | 696 | IPR001371 | Glycoside hydrolase, family 14B, plant |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0000272 | Biological Process | polysaccharide catabolic process | ||||
GO:0048831 | Biological Process | regulation of shoot system development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0016161 | Molecular Function | beta-amylase activity |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 702 aa Download sequence Send to blast |
MATDMQKLIG TSEEDDEEEM DMDVKEEDDE DENREKHIAR QVMVGIDGGM ASNSSNNQFL 60 HHQHIQDQVS TLGGGGGARR SRPLEEKERT KLRERHRRAI TARILAGLRR HGNYNLRVRA 120 DINDVIAALA REAGWVVLPD GTTFPSRTQN PRPLGGTSAG AISSSTHLVS QQTPSASLRG 180 VSPGYRPSVE YNSSRLKGVF VPAPSPYDLP TSTQSQNSAM MGDGGEQTES HPLISGSLDN 240 VNDKQIVDMS PKLLERDFTG SSYVPVYVML PLGVINMKCE LADPDGLLKQ LRVLKSASVD 300 GVMVDCWWGI VEAHAPQEYN WNGYKRLFQM VHELKLKLQV VMSFHECGGN FGDDVCIPLP 360 HWIAEIGRSN PDIFFTDREG RRNPECLSWG IDRERVLRGR TALEVYFDYM RSFRVEFDEF 420 FHDDLISMVE IGLGPCGELR YPSCPVKHGW RYPGIGEFQC YDQYLLKSLK KTAEARGHPC 480 WARGPENAGT YNTQPHETGF FCDGGDYDVY YGRFFLNWYS RILVEHGDRV LSLAKLAFEG 540 TQISAKLSGI HWWYKTASHA AELTAGYYNP CNRDGYAAIA VMLKKHGATL NISYSELRML 600 DQQVDFSDAL SDPDGLLWQV LNAAWDVDIP IASENALPCH DRITYNKILD NAKPLNNPDG 660 RHFWSFTYLR LSPLLMDRQN FMEFERFVKK MHGEAVLDLQ V* |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wdr_A | 1e-157 | 262 | 694 | 10 | 444 | Beta-amylase |
Search in ModeBase |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Manes.05G034900.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_021613139.1 | 0.0 | beta-amylase 7 isoform X1 | ||||
Refseq | XP_021613140.1 | 0.0 | beta-amylase 7 isoform X1 | ||||
Refseq | XP_021613141.1 | 0.0 | beta-amylase 7 isoform X1 | ||||
Refseq | XP_021613142.1 | 0.0 | beta-amylase 7 isoform X1 | ||||
Refseq | XP_021613143.1 | 0.0 | beta-amylase 7 isoform X1 | ||||
Swissprot | O80831 | 0.0 | BAM7_ARATH; Beta-amylase 7 | ||||
TrEMBL | A0A251KSS8 | 0.0 | A0A251KSS8_MANES; Beta-amylase | ||||
STRING | cassava4.1_002728m | 0.0 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10883 | 33 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G45880.1 | 0.0 | beta-amylase 7 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Manes.05G034900.1.p |
Publications ? help Back to Top | |||
---|---|---|---|
|