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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Manes.05G017100.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
NAC |
Protein Properties |
Length: 394aa MW: 44919.2 Da PI: 6.9835 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.05G017100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 168.3 | 2.5e-52 | 15 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatg 87
+ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg
Manes.05G017100.1.p 15 VPPGFRFHPTEEELLHYYLRKKVSYEKIDL-DVIRDVDLNKLEPWDIQEKCKIgttPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATG 103
69****************************.9***************964444222455******************************* PP
NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+dk ++s +g+ +g++ktLvfykgrap+g+k+dW+mheyr+
Manes.05G017100.1.p 104 RDKVIYS-NGRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRI 143
*******.999****************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009809 | Biological Process | lignin biosynthetic process |
GO:0009834 | Biological Process | plant-type secondary cell wall biogenesis |
GO:0009901 | Biological Process | anther dehiscence |
GO:0010047 | Biological Process | fruit dehiscence |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 394 aa
Download sequence Send
to blast |
MSESMSISVN GQSRVPPGFR FHPTEEELLH YYLRKKVSYE KIDLDVIRDV DLNKLEPWDI 60 QEKCKIGTTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIYS NGRRIGMRKT 120 LVFYKGRAPH GQKSDWIMHE YRIEDNINVV DANVSNVLGE AAQEDGWVVC RVFKKKNHHK 180 TLDSPLSSNS INMEARTTEM FKPFNEGVVD RLLQYMGTKS EEEKEANNIS SRFLRPTDAT 240 INNVYHDRCM KLPSLESPNS SCSQNCYPPM INEGSISNQV SSMDPNSVYP LDSGLTNWAA 300 LDRLVASQLN GQTETSRQFG CFNEPNMSYC NPVEQHQPDL QFPTVRPSFS LPYSTTYQGI 360 LQDYNNETEL WNFSTRSPSS TADPICYVSK SSV*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST2 and NST3, required for the secondary cell wall thickening of sclerenchymatous fibers, secondary xylem (tracheary elements), and of the anther endocethium, which is necessary for anther dehiscence. May also regulate the secondary cell wall lignification of other tissues. {ECO:0000269|PubMed:16214898, ECO:0000269|PubMed:17237351, ECO:0000269|PubMed:17333250}. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Gondolf VM, et al.
A gene stacking approach leads to engineered plants with highly increased galactan levels in Arabidopsis. BMC Plant Biol., 2014. 14: p. 344 [PMID:25492673] - Jaradat MR,Ruegger M,Bowling A,Butler H,Cutler AJ
A comprehensive transcriptome analysis of silique development and dehiscence in Arabidopsis and Brassica integrating genotypic, interspecies and developmental comparisons. GM Crops Food, 2014. 5(4): p. 302-20 [PMID:25523176] - Yuan Y,Teng Q,Zhong R,Ye ZH
TBL3 and TBL31, Two Arabidopsis DUF231 Domain Proteins, are Required for 3-O-Monoacetylation of Xylan. Plant Cell Physiol., 2016. 57(1): p. 35-45 [PMID:26556650] - Yang C, et al.
Transcription Factor MYB26 Is Key to Spatial Specificity in Anther Secondary Thickening Formation. Plant Physiol., 2017. 175(1): p. 333-350 [PMID:28724622] - Pascual MB, et al.
PpNAC1, a main regulator of phenylalanine biosynthesis and utilization in maritime pine. Plant Biotechnol. J., 2018. 16(5): p. 1094-1104 [PMID:29055073] - Liu C,Yu H,Li L
SUMO modification of LBD30 by SIZ1 regulates secondary cell wall formation in Arabidopsis thaliana. PLoS Genet., 2019. 15(1): p. e1007928 [PMID:30657769]
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