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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Manes.05G015800.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
bHLH |
Protein Properties |
Length: 397aa MW: 45385.3 Da PI: 5.521 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.05G015800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 43.2 | 7.1e-14 | 203 | 254 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+
Manes.05G015800.1.p 203 QRMTHIAVERNRRRQMNDHLNSLRSLMPPS---YVQRGDQASIIGGAIDFVKELE 254
79****************************...9******************995 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 397 aa
Download sequence Send
to blast |
MERLQGLFDP CFLGEQLDAE GLERGFVNTE NLRTFEEEET QFSMPSLEDK IPFLQMLQGV 60 EYPPFFPLKE PNFQTLLKLQ HLKRPWNNYI TEADTQVQAL ELESCVTHDI ADLHSPAKSE 120 TKDFQNPHSN SCLEDVSPEP KRQANLIGRF CKERNSDSSF PWTHPQTMLH ETHFSKTSPV 180 VTKERKKRKR TRPTKNKEEV ENQRMTHIAV ERNRRRQMND HLNSLRSLMP PSYVQRGDQA 240 SIIGGAIDFV KELEQLLQSL EAQKRMRKTE EAVAAMGMTS NWLFTSQAEC NIQGESGNCE 300 EEAKVKRKSE AAEIEVTVIK NHVNLKIQSE KKAGQLLRAI VALEDLRLTV LHLNITSSEN 360 TVLYSFNLKI EDDCKLESAD EIAATVDEIF TIINGN*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 184 | 189 | RKKRKR |
2 | 185 | 190 | KKRKRT |
3 | 203 | 214 | RMTHIAVERNRR |