PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.05G014800.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family NAC
Protein Properties Length: 374aa    MW: 41985.5 Da    PI: 5.0931
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.05G014800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM136.91.3e-42121392127
                  NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                          p+G+rFhPtd+elv ++L++k+   + e    i+e++++++ePwdL   +k+k++++  yfF++rd kya+++r+nr+t++gyWk tgk 
  Manes.05G014800.1.p  12 PVGYRFHPTDQELVGHFLNRKILYPDDEK-MPIAELKVCDFEPWDLSdkSKIKSNDQVFYFFCPRDYKYAHSRRSNRTTNAGYWKPTGKP 100
                          89*********************999666.67**************8534788888888******************************* PP

                  NAM  90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                          ++v+   +++ +g+k+tLvfyk+++pk+++t+W+mhey+
  Manes.05G014800.1.p 101 RKVKGIgTKKPIGTKRTLVFYKKEHPKPVRTKWIMHEYE 139
                          ***98767778***************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-466153IPR003441NAC domain
PROSITE profilePS5100542.2111164IPR003441NAC domain
PfamPF023656.2E-2512139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MATAIHPKRS NPVGYRFHPT DQELVGHFLN RKILYPDDEK MPIAELKVCD FEPWDLSDKS  60
KIKSNDQVFY FFCPRDYKYA HSRRSNRTTN AGYWKPTGKP RKVKGIGTKK PIGTKRTLVF  120
YKKEHPKPVR TKWIMHEYEY IPQGNFLLCK LKDKSKGHAR ISETKQWASA SESVSTVDSS  180
CGECAPSDLM GSNAEDHNVD EITAGEQNCT VSLDLGNLDQ SEVTANSASD ESDLGYHLAS  240
EPEDENPNEM TATSTYEKCQ FSSQLTSDIE NHNSDKTSEI LVSEQDEWSP HATTPDCGNH  300
SAYDTTDMST LSSPSVLEIN AAEAQFLEGP PTFFDELKAL WEPKDFLNSA LFSPRRTEES  360
LFFSNFLLSG TSS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-281213916139Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.05G014800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021611637.10.0NAC domain-containing protein 62-like
RefseqXP_021611638.10.0NAC domain-containing protein 62-like
TrEMBLA0A251KRR00.0A0A251KRR0_MANES; Uncharacterized protein
STRINGcassava4.1_009914m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1616767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.19e-36NAC 014