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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Manes.05G007400.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
MYB |
Protein Properties |
Length: 458aa MW: 51049.6 Da PI: 8.1561 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.05G007400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.3 | 3e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl
Manes.05G007400.1.p 14 KGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61
678*******************************************97 PP
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2 | Myb_DNA-binding | 44.3 | 4.2e-14 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg ++++E+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++
Manes.05G007400.1.p 67 RGTFSQQEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110
899*******************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 458 aa
Download sequence Send
to blast |
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG 120 IDPVTHKPLS EVENNGEDKN PPANNVQDKA SGVSNELNFL QANNSNRGQS LQEKKRSPAS 180 AQAYQLEGQG SNSKTMSSNA NNHRNNSNLL TPVSNKDFFL ERFATSHQEG STSNCQPSDL 240 HFPLQQLNYA SNARLITNSI PSLWFTNTSK PLDMNSEFSS SSIPSILPPT TSSFLSTPLA 300 FKPSVTVPSD DPPLASFPIS SSRYWEAGAP SNNSNSSTGS SGYTELQTNS SFFENTLFSW 360 GLGDCSSTEK EGQNQLMGSQ QEDVKWPEYL HNPLIMAAAL QNQSPQSLYN EIKSETQFLS 420 ENSSGMWPHN QQQQEPFQTS NICAKDIQRL TAAYGHI*
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