 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Manes.04G162400.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
Family |
MYB |
Protein Properties |
Length: 297aa MW: 31509.2 Da PI: 7.2079 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.04G162400.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 33.8 | 7.9e-11 | 12 | 56 | 4 | 46 |
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
WT e d+ + da + ++ + +W++Ia+ ++ g+tl+++k ++
Manes.04G162400.1.p 12 WTREQDKAFEDALATYPEDaldRWEKIAADVP-GKTLEEVKVHYEL 56
********************************.**********975 PP
|
2 | Myb_DNA-binding | 42 | 2.2e-13 | 119 | 163 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT++E+ l++ + ++G+g+W++I+r + +Rt+ q+ s+ qky
Manes.04G162400.1.p 119 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 163
6*******************************************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 297 aa
Download sequence Send
to blast |
MTVDEVGCSS LWTREQDKAF EDALATYPED ALDRWEKIAA DVPGKTLEEV KVHYELLLED 60 LNQIEAGCVP LPNYSEGSAS HAGDEGTSKK SGHLGHHSSE STHGNKASRS DQERRKGIAW 120 TEDEHRLFLL GLDKYGKGDW RSISRNFVVT RTPTQVASHA QKYFIRLNSM NKDRRRSSIH 180 DITNVGNGEN SAPQGPITGQ TNGSAAGGSV GKVGKLPPHH PAGPPGIGVY GPPTMGQPIG 240 GPLVSAVGTP VNLSAPAHMA YGVRAPVPGT VSGVLPGAPM SMGPMTYPMP PTTAHR*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription activator that coordinates abscisic acid (ABA) biosynthesis and signaling-related genes via binding to the specific promoter motif 5'-(A/T)AACCAT-3'. Represses ABA-mediated salt (e.g. NaCl and KCl) stress tolerance. Regulates leaf shape and promotes vegetative growth. {ECO:0000269|PubMed:26243618}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Induced by salicylic acid (SA) and gibberellic acid (GA) (PubMed:16463103). Triggered by dehydration and salt stress (PubMed:26243618). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:26243618}. |