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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Manes.04G148700.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
| Family |
Trihelix |
| Protein Properties |
Length: 415aa MW: 46152.1 Da PI: 9.3953 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.04G148700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 47.1 | 6.3e-15 | 120 | 207 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W++ + +Li+a e+ +l+rg+lk+++W+ev++ + ++ ++ +qCk++++ ++k+yk +k+ + + s++p+f++l+
Manes.04G148700.1.p 120 CWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVssreDYKKAAKTDIQCKNRIDTVKKKYKLEKAKIAAG--GGPSKWPFFERLD 207
7*************************************84333344455778******************99997..67778******98 PP
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| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| Pfam | PF13837 | 3.6E-26 | 118 | 209 | No hit | No description |
| Sequence ? help Back to Top |
| Protein Sequence Length: 415 aa
Download sequence Send
to blast |
MVFSVNSFPW MKLTLFNYLA GNSPHHAGDG NSYAFPIIFL HLAPSPTSLF STSMDDDEEI 60
QSHTSEAIGS PSLSPPNGRI TVTVAAGPPS SLPQQQNINN LALTVPIHQP KTNGGGREDC 120
WSEGATAVLI DAWGERYLEL SRGNLKQKHW KEVADIVSSR EDYKKAAKTD IQCKNRIDTV 180
KKKYKLEKAK IAAGGGPSKW PFFERLDQLI GPTAKIPVTA ASLSSKVPMG IPVGIHSGGA 240
SGSNQYQFHE GKAQMKSNQI TKNHNVKPQF RKRSQVETES SSEEEEENFP DSEDSLPPEK 300
KSRVVVQRGV NTKEVKERKG WGNSIRMLTQ AILKFGEVYE QAESMKLQQV MEMEKTRMKF 360
AKELELQRMQ FFMKTQMEIS QLKCSRRGGN VSHQNHHISG NNIIHTNNNS DSDN*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G14180.1 | 4e-87 | sequence-specific DNA binding transcription factors |
