![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Manes.04G114000.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 179aa MW: 20154.8 Da PI: 8.9716 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60 | 5.4e-19 | 5 | 52 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkk 52 ++++GVr+++ +g+Wv+eIr+p +r++lg+f taeeAa+a+++a+ Manes.04G114000.1.p 5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFQTAEEAARAYDEAAVL 52 59*******9.**********8.....334*********************965 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 8.10E-35 | 5 | 65 | No hit | No description |
PROSITE profile | PS51032 | 21.417 | 6 | 63 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 9.6E-34 | 6 | 64 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.4E-40 | 6 | 69 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.69E-21 | 6 | 65 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.3E-11 | 6 | 50 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.4E-10 | 7 | 18 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.4E-10 | 29 | 45 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 179 aa Download sequence Send to blast |
MVQTKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFQTAE EAARAYDEAA VLMCGRNAKT 60 NFPVSTDQQG LPSLLSAKLR KSCKSPSLTC LRLDNENCQI GVWQKTAGPQ SSSNWVRIVE 120 LGEKYAQATQ SNLPVSETRT PQEKMPAKEG HGDDRGDSDS DEEKRVALQM IEELLNWN* |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 7e-16 | 2 | 67 | 1 | 67 | ATERF1 |
3gcc_A | 7e-16 | 2 | 67 | 1 | 67 | ATERF1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}. |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Manes.04G114000.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_021608989.1 | 1e-131 | ethylene-responsive transcription factor WIN1-like | ||||
Swissprot | Q9XI33 | 2e-64 | WIN1_ARATH; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | A0A2C9W437 | 1e-130 | A0A2C9W437_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_029669m | 1e-131 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF576 | 33 | 144 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G25390.2 | 3e-55 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Manes.04G114000.1.p |