PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.04G093200.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 272aa    MW: 30644.7 Da    PI: 5.327
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.04G093200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64e-2074123255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+GVr+++ +g+W+AeIrdp     + +r++lg+f+tae Aa a+++a++k++g
  Manes.04G093200.1.p  74 HYRGVRQRP-WGKWAAEIRDPQ----KaARVWLGTFDTAEAAATAYDEAALKFKG 123
                          7********.**********93....36************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.2E-3273132IPR001471AP2/ERF domain
CDDcd000183.06E-2074132No hitNo description
PROSITE profilePS5103225.05374131IPR001471AP2/ERF domain
SMARTSM003806.4E-3874137IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-2274132IPR016177DNA-binding domain
PfamPF008471.1E-1374123IPR001471AP2/ERF domain
PRINTSPR003671.6E-117586IPR001471AP2/ERF domain
PRINTSPR003671.6E-1197113IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MHGKRPLPSS DEAKEDQISY TQKPFFQNQG QYVLAQHVMA NEHDELMQAN LESARIKHFT  60
SQNADQGEIT RRRHYRGVRQ RPWGKWAAEI RDPQKAARVW LGTFDTAEAA ATAYDEAALK  120
FKGTKAKLNF PERRLQGGSD NNFCTSFSAS ANYQNPPLLV SNNNSTVDSS MNDPPPPPLM  180
THEAFPDLFH YAHLLSCNED GYLEYAAPSG LYHNYNQEPF LCPSLSSASL AVPHQQQTED  240
EDFSSFSPQM AATDQHFLDQ KEEFDNATPR E*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-2473133162ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.04G093200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021611078.10.0ethylene-responsive transcription factor ERF113-like
TrEMBLA0A2C9W1060.0A0A2C9W106_MANES; Uncharacterized protein
STRINGcassava4.1_032276m1e-173(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98534115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.13e-31ERF family protein