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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Manes.04G009200.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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| Family |
C2H2 |
| Protein Properties |
Length: 300aa MW: 32365.5 Da PI: 4.5987 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.04G009200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 12.4 | 0.00049 | 273 | 296 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
+ C+ C +sF + L++H + H
Manes.04G009200.1.p 273 FACKSCERSFASDVALQSHSKAkH 296
78*****************88767 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 300 aa
Download sequence Send
to blast |
MEFWGIEVKA GEPVKVTPDP ETIIHLSQAA LGESKKGNES VPLFLKIDDK KIVLGTLSPE 60
NIPQLPFDLV FEREVELSHN WKSGSVYFCG YKSQLPEEEY PSPEDSEDEE PFPLMNADNG 120
NVQPVVENTK PAKAKANVSK PDSSVKQKAK PVDPKKEIKA EDESDDDESD EQDSSDEEGD 180
SDEEMSEDSE EEGDSESEDE ETPKKAEKGK KRPNESATKT PVPSKKIKSV TPQKTDGKKG 240
GHTATPHPAK GGGKAAANGS NTKAQTPKSG GQFACKSCER SFASDVALQS HSKAKHGGK*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). {ECO:0000250}. |
