PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.03G210600.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family CAMTA
Protein Properties Length: 992aa    MW: 111309 Da    PI: 7.5069
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.03G210600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1179.63.8e-56201363118
                 CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseen 91 
                          +e k+rwl+++ei++iL n+++++lt e++ +p+ gsl+L++rk +ryfrkDG+ w+kkkdgktvrE+hekLK g+v+vl+cyYah+e+n
  Manes.03G210600.1.p  20 EEaKHRWLRPNEILEILRNYQRFKLTPEPPIQPSAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVREAHEKLKAGSVDVLHCYYAHGEDN 109
                          4559************************************************************************************** PP

                 CG-1  92 ptfqrrcywlLeeelekivlvhylevk 118
                           +fqrrcyw+L+ +le+ivlvhy+evk
  Manes.03G210600.1.p 110 DSFQRRCYWMLDGKLEHIVLVHYREVK 136
                          ************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143780.28115141IPR005559CG-1 DNA-binding domain
SMARTSM010762.2E-7718136IPR005559CG-1 DNA-binding domain
PfamPF038591.5E-4921134IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.105.2E-6432521IPR013783Immunoglobulin-like fold
PfamPF018335.1E-6434519IPR002909IPT domain
SuperFamilySSF812966.47E-17434520IPR014756Immunoglobulin E-set
SuperFamilySSF484031.66E-13620730IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.201.1E-13630731IPR020683Ankyrin repeat-containing domain
CDDcd002044.23E-10631749No hitNo description
PROSITE profilePS5029715.3636730IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008810.232669701IPR002110Ankyrin repeat
SMARTSM002480.0064669698IPR002110Ankyrin repeat
SMARTSM002481400708737IPR002110Ankyrin repeat
SuperFamilySSF525407.43E-8839893IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000153.2842864IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.316843872IPR000048IQ motif, EF-hand binding site
PfamPF006120.069844863IPR000048IQ motif, EF-hand binding site
SMARTSM000150.061865887IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.828866894IPR000048IQ motif, EF-hand binding site
PfamPF006120.0056869887IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.504947975IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 992 aa     Download sequence    Send to blast
MAETRRYFPN QPLDLEQILE EAKHRWLRPN EILEILRNYQ RFKLTPEPPI QPSAGSLFLF  60
DRKALRYFRK DGHRWRKKKD GKTVREAHEK LKAGSVDVLH CYYAHGEDND SFQRRCYWML  120
DGKLEHIVLV HYREVKEGYR SGVSHLLADR GTQVESPQPI SAPSIAQTSS PAFTAQMSFA  180
SNPNEIERNG QTLSSEFEDV DSRDNVGACL TEQKIGSVSH NASLLAAEVE GFTMLSTNGV  240
KFDHSTESSL WAEIPGSSKN AYHVHDQKFY VGQPRGADVI TRKLTYSRID SDVPDSVATG  300
DRLINDVDDQ AQAAIPQRSI QEHDFKLVPN SQFHDHSGSQ TAASIAQVDN KPKDGGASTN  360
ELGELKKLDS FGRWMDKEIG GDCDDSLMAS DSGNYWNTLG TENEDKEVSS LSHHMQLDIE  420
SLGPSLSQEQ LFSIRDFSPD WAYSGVETKV LIVGTFLGSK KFSSETKWGC MFGEIEVSAE  480
VLTDNVIRCQ APLHATGQVP FYVTCRNRLA CSEVREFEYR ENASRVASIS NSSLQEEEQR  540
FLVRLAKLLH LGLEKKWLNC SIERCSKCKI RSTLYSMRNN IDNELARAKE SWMVSEVNFT  600
DARDKFIQSL LSDKLFEWLV CKVHGEGKGP DMLDGEGQGV IHLTAGLGYQ WAMGLIVAAS  660
NNPNFRDAQG RTGLHWASYF GREETVIELV RLGVDPTLVD DPTSAFPGGQ TAADLASSQG  720
HKGIAGFLAE AFLTSHLSSL NIKENITDTI DATIAAEKPT EAAAQVAFPL DGGADDGFSL  780
KGTLAAVRKS TLAAALIQAA YRSSSFRYRQ FPKSNDDSEV SLDLAALGPL NKYQRRSDFE  840
DYLHSAAARI QQKYRGWKGR KEFLKIRNRI VKIQAHVRGR QVRRQYKKVI WSVSIVEKAI  900
LRWRRKRSGL RGFRLEKLCG DVIQGTEKTD EYEFLRIGRK QKFAGVEKAL ARVKSMVRDP  960
VARDQYMRLV TKSENLKMNN GEINVSPQDL S*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.03G210600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021607348.10.0calmodulin-binding transcription activator 1-like isoform X1
TrEMBLA0A2C9WBS00.0A0A2C9WBS0_MANES; Uncharacterized protein
STRINGcassava4.1_023110m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF128892526
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.20.0signal responsive 1