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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Manes.03G028900.3.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
NAC |
Protein Properties |
Length: 464aa MW: 52357.2 Da PI: 7.0572 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.03G028900.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 115.2 | 6.9e-36 | 46 | 188 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra..tk. 79
lp+G++F+Ptd+el+ e+L++kve+k+++ + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ t+
Manes.03G028900.3.p 46 LPAGVKFDPTDQELI-EHLEAKVEAKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqTEc 133
799************.99*********5553344444434666646**********.555666799******************745225 PP
NAM 80 .....sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
+ +W++tgk+++v+ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l
Manes.03G028900.3.p 134 dmqggETRWHKTGKTRPVML-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 188
55544778************.999***********5547999999*********98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 464 aa
Download sequence Send
to blast |
MSKSNLGSIS SSDLIDAKLE EHQLCGSKQC PGCGHKIEGK PDWVGLPAGV KFDPTDQELI 60 EHLEAKVEAK DMKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDMQGGET RWHKTGKTRP VMLNGKQKGC KKILVLYTNF GKNRKPEKTN 180 WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWTDRTA ITGEGSNDPN SRRDSGSGSC 240 SSKEIIPHRD EITGAGVAAA LSSYSAIDIQ QLKSDHFGFP PFRKSFDEVG IGEASTAREA 300 PVSGTCNDIG EHHQRPHHMA HDHHQQQPQH HHVHHQIATA AFQISRPSHP ISAIISPPPL 360 HHTSIILEED PYHVSRLMLQ NEIQQQHHHH HHQQQQQHHH HQQQQQQQHH KLGGRSASGL 420 EELIMGCTST DIKEESSIAN PQEAEWLKYS SFWPDPDNQD HHG*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator involved in xylem formation (PubMed:25265867, PubMed:25535195). Promotes the expression of the secondary wall-associated transcription factor MYB46 (PubMed:25265867). Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867, PubMed:25535195). Acts as upstream regulator of NAC101/VND6 and LBD30/ASL19 (PubMed:25535195). {ECO:0000269|PubMed:25265867, ECO:0000269|PubMed:25535195}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KR605209 | 0.0 | KR605209.1 Manihot esculenta NAC transcription factors 71 mRNA, complete cds. |