PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Manes.02G197700.1.p

Organism

Manihot esculenta

Taxonomic ID

3983

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot

Family

bHLH

Protein Properties

Length: 180aa MW: 19290.8 Da PI: 4.414

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Manes.02G197700.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.1	2.1e-05	101	141	11	55
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 RR++i +++ L++l+P + k Ka +L + ++Y +sLq Manes.02G197700.1.p 101 ARRENISERMKILQDLVPGC----IKIIGKALVLDEIINYAQSLQ 141 7****************9....688***********99998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	11.42	90	140	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	5.89E-11	101	160	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	6.51E-5	102	145	No hit	No description
Gene3D	G3DSA:4.10.280.10	2.0E-11	103	159	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence Send to blast
MDPPLITEIS FSAANPSSYT LTEIWPFAAI NGETGGGGLG LRMGNLVGGP SELDGSVEES 60 TVTEQSVGGG GGGSGRKRRD LSLEDETSNM VSTTSSGNEF ARRENISERM KILQDLVPGC 120 IKIIGKALVL DEIINYAQSL QRQVEFLSMK LEAVNSRMNV NPTTEGFQLK DKFTILIWC*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Manes.02G197700.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021603840.1	8e-92	transcription factor bHLH79-like
TrEMBL	A0A2C9WFH1	1e-126	A0A2C9WFH1_MANES; Uncharacterized protein
STRING	Lus10033120	5e-58	(Linum usitatissimum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1171	34	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59640.1	3e-33	BIG PETAL P

Link Out ? help Back to Top
Phytozome	Manes.02G197700.1.p