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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Manes.02G179100.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
Trihelix |
Protein Properties |
Length: 630aa MW: 69379.3 Da PI: 6.7176 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.02G179100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 94.7 | 9.1e-30 | 77 | 161 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW++qe+laL+++r++m+ ++r+++ k+plWeevs+k++e g++rs+k+Ckek+en+ k++k++keg+ ++ ++ +t+++fdqlea
Manes.02G179100.1.p 77 RWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLAELGYNRSAKKCKEKFENVYKYHKRTKEGRTGK--QEGKTYRFFDQLEA 161
8********************************************************************96..55557*******85 PP
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2 | trihelix | 106.7 | 1.5e-33 | 455 | 540 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+k ev+aLi++r+ ++++++++ k+plWee+s+ mr+ g++r++k+Ckekwen+nk+ykk+ke++kkr +e+s+tcpyf+ql+a
Manes.02G179100.1.p 455 RWPKVEVQALINLRTTLDSKYQENGPKGPLWEEISAGMRKLGYNRNAKRCKEKWENINKYYKKVKESNKKR-PEDSKTCPYFHQLDA 540
8*********************************************************************8.99***********85 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010192 | Biological Process | mucilage biosynthetic process |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 630 aa
Download sequence Send
to blast |
MLGDSSSVLA TTTTAAAGGS SSDPPAAAPP HTLSTYQLPG GGTHESISEV GHVGSNNSGA 60 DDKGRGDEGD RSFGGNRWPR QETLALLKIR SDMDVAFRDA SVKGPLWEEV SRKLAELGYN 120 RSAKKCKEKF ENVYKYHKRT KEGRTGKQEG KTYRFFDQLE AFENQPSSFS SPPPPQTQQP 180 PQQQQLKPQT PAVTTIGMQV AHPSPPPPPV GAAPISTVPS NTAPSATMVS QGIVTTGINL 240 TIPSFPTGNP TILPSAQATN PTMNPSSFSN FSPDLLSNST SSSTSSDVEL HGRHRKKRKW 300 KEFFDRIMKE VIHKQEDMQR KFLEAIEKRE HDRMAREESW RMQEMARINR EREILAQERS 360 IAAAKDAAIM AFLQKLSDQQ NPGQPQNTPP PPPAATPTPI PVPVSVPVPA PVPVPAPQPI 420 TMVPVAQAAP PQPATNLETK SDSGDQSLTP ASSSRWPKVE VQALINLRTT LDSKYQENGP 480 KGPLWEEISA GMRKLGYNRN AKRCKEKWEN INKYYKKVKE SNKKRPEDSK TCPYFHQLDA 540 LYKEKNKNDS SSNIQLKPEN SVPLMVRPEQ QWPPPQQEHG PDSVMEDLES EDHQNHQDED 600 DKDNDDDEED EAGGYEIVAN RQATISSAG*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |