PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.02G121000.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family C2H2
Protein Properties Length: 379aa    MW: 42207.6 Da    PI: 8.6487
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.02G121000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00022141164123
                          EEETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                          ++C+ Cg+ F  + +L++H+   H
  Manes.02G121000.1.p 141 FPCTACGEIFQKPQLLEQHQAIkH 164
                          89******************9877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.681141169IPR007087Zinc finger, C2H2
PROSITE patternPS000280143164IPR007087Zinc finger, C2H2
SuperFamilySSF563991.15E-12166377No hitNo description
Gene3DG3DSA:3.90.228.102.2E-5313377IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MAAVVSVFTK FLSIFILLLH LGCFIFTAKD HKPPTKKRKV SLLSPISSSS TRLKPRRALS  60
SSWFYLKRIF SSKTYKTTSS QAQSPVPTLA SARSSQHSIV SMIPPEDHAS VIPPHKKPSG  120
SCQESDISTN DQFFPLRNDI FPCTACGEIF QKPQLLEQHQ AIKHAVSELQ DGDSGKNIVH  180
IIFKTGWSCK EKNPEIHRIL KIHNGPKILS RFEEYRELVK AKAARNGGVK RRDERCIADG  240
NELLRFFCST FMCDLGANEN SSICNQQYCS VCGIIKSGFS PKMDGISTLS SSWRAHMTIP  300
EDVEEEFKFM NVKRAMLVCR VLAGRVGCEL EEEDKEDGGF DSVVARGGSG IHSRVDEEDL  360
VVFNPRAVLP CFVIVYTV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.02G121000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021605545.10.0uncharacterized protein LOC110609998
TrEMBLA0A2C9WFI30.0A0A2C9WFI3_MANES; Uncharacterized protein
STRINGcassava4.1_034451m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106682936
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.11e-119C2H2 family protein