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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Manes.02G100100.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
|
| Family |
SRS |
| Protein Properties |
Length: 333aa MW: 35513.3 Da PI: 6.9096 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Manes.02G100100.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 218.2 | 1.8e-67 | 110 | 254 | 5 | 154 |
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssa 94
++sCqdCGnqakkdC h+RCRtCC+srg+dC thvkstWvpa+krrerqqql+a+++++ + +++kr e+ +s+l++ +l+++
Manes.02G100100.1.p 110 GVSCQDCGNQAKKDCIHMRCRTCCRSRGLDCPTHVKSTWVPASKRRERQQQLNALQQQQL---RGENPKRLSEN--PCSSSLACIRLPNS 194
579**************************************************9977664...45555555544..678999******** PP
DUF702 95 eskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
s le ++P+evss+avfrcvrvs+++++++++aYqtav+igGh+fkGiLyd+G+e+
Manes.02G100100.1.p 195 ASDAGLELGNFPAEVSSPAVFRCVRVSGMEKDDDQYAYQTAVNIGGHLFKGILYDHGPES 254
**********************************************************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MAGLFSLGGG SGGGGGGGRG SNQDDQHDHP PTEIPQESWY WYKNEDIPYK GFELWQQQEF 60
LYQRHQNPQQ HLYSSAAGLG VGPSRSSINV SDESSSRSAF MMMRSSSGVG VSCQDCGNQA 120
KKDCIHMRCR TCCRSRGLDC PTHVKSTWVP ASKRRERQQQ LNALQQQQLR GENPKRLSEN 180
PCSSSLACIR LPNSASDAGL ELGNFPAEVS SPAVFRCVRV SGMEKDDDQY AYQTAVNIGG 240
HLFKGILYDH GPESTYMPAT ETSSADASGG VQQLNLITAA TASAVISPTG GGGGITSASS 300
SAAAAFIDPS SLYPTPLNTY IAGTPFFPNP RS*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM). {ECO:0000269|PubMed:12361963, ECO:0000269|PubMed:16740145, ECO:0000269|PubMed:16740146, ECO:0000269|PubMed:18811619, ECO:0000269|PubMed:20154152, ECO:0000269|PubMed:22318676}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Regulated by ESR1 and ESR2. {ECO:0000269|PubMed:21976484}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G51060.1 | 3e-80 | Lateral root primordium (LRP) protein-related |
