PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.02G095100.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 352aa    MW: 39148.8 Da    PI: 6.2388
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.02G095100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.42.9e-09195242455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++i +++  L+el+P +    +k    a  L + ++YI+sLq
  Manes.02G095100.1.p 195 SHSLAERARREKISKKMKCLQELVPGC----NKITGRAGLLDEIINYIQSLQ 242
                          8**************************....899*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.14E-15189257IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.73E-8189246No hitNo description
Gene3DG3DSA:4.10.280.101.4E-15191256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.723191241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.5E-7195242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-8197247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MDMSTVLEKQ QARLKWLQHS CMMTNPNDYS LQSDSMPHLH GFFDNGDNVH LERQPETFLG  60
SSDFSIGGSG LVANDKMGLV RTDVAAHSTE IYYCLSRTSS CQVGIELGEA ARMEEDVALM  120
EGTQSDNQRD SSNKRKAEYF AAEEFKGQVE VQSKVKEKTS TEISADSCKK NHKTSEVRKP  180
DYIHVRARRG QATDSHSLAE RARREKISKK MKCLQELVPG CNKITGRAGL LDEIINYIQS  240
LQRQVEFLSM KLAAFAPRQE LNADNFSGKE YLASFPTATI SPGVINMSQP EHNLVQEEAG  300
ANNPTEAAPE RTASSSGFIH ELCLDSSCFS QVQPFWKPDS QDLHNMGFHK G*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.02G095100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021605333.10.0transcription factor HBI1-like
TrEMBLA0A2C9WCG30.0A0A2C9WCG3_MANES; Uncharacterized protein
STRINGcassava4.1_028410m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1781856
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18300.22e-57bHLH family protein