PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.02G080200.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family FAR1
Protein Properties Length: 252aa    MW: 28396.9 Da    PI: 6.6346
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.02G080200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR191.41.2e-2887174291
                 FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                          fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p
  Manes.02G080200.1.p  87 FYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTP 174
                          ******************************************9988..9**************************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.3E-2687174IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MEFGVNGDAN GVMVGTVELE DSKACDESEI GVTSADEDFQ QDQDDKVDKQ SLGKDAILDG  60
VPSAGTVPAD EPYVGQEFES EAAAHAFYNA YATRVGFIIR VSKLSRSRRD GSAIGRALVC  120
NKEGYRMPDK REKIVRQRAE TRVGCRAMIL VRKVSSGKWV VTKFVKEHTH PLTPGKGRRD  180
CIYDQYPNEH DKIRELSQQL AIEKKRAATY KRHLELIFEQ IEEHNESLSK KIQHIVDSVR  240
EMENKEQQNR V*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.02G080200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021605724.10.0protein FAR1-RELATED SEQUENCE 6-like isoform X1
TrEMBLA0A2C9WE960.0A0A2C9WE96_MANES; Uncharacterized protein
STRINGcassava4.1_015065m1e-177(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24533072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-101FAR1 family protein