PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.02G068800.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | bHLH | ||||||||
Protein Properties | Length: 275aa MW: 30818.5 Da PI: 7.5978 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.1 | 9e-10 | 167 | 214 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+++Er RR++iN+++ L++l+P + +k + a +Le+ ++Y++sLq Manes.02G068800.2.p 167 SHSIAERVRREKINNKLRCLQDLVPGC----HKSMGMAVMLEEIINYVHSLQ 214 8*************************9....788*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 4.06E-11 | 161 | 218 | No hit | No description |
SuperFamily | SSF47459 | 3.4E-17 | 161 | 232 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.243 | 163 | 213 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.4E-16 | 163 | 225 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 5.1E-7 | 167 | 214 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.5E-9 | 169 | 219 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence Send to blast |
MAEFTEYLQR LRPSQPFMEM DMNAQMFKQL PEINSSPLEN FSVPDFSVDS FLAHHQQPPP 60 DQFPASYDHC GFSSTFHQPD ILNSAPVVHA VTSTSSQNVL TNSCKKRKAD AQSISSSSKN 120 ISPTASTTNT KKKNLGRGRK GKNKEKEVDE AEEVVHVRAK RGQATDSHSI AERVRREKIN 180 NKLRCLQDLV PGCHKSMGMA VMLEEIINYV HSLQNQVEFL SMELAAASCS YDFNLETESS 240 RKAQGTNSPG AQERQKWWRE GNGELGYFQS TWSI* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.02G068800.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021603742.1 | 0.0 | transcription factor BEE 1-like isoform X2 | ||||
TrEMBL | A0A2C9WBZ1 | 0.0 | A0A2C9WBZ1_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_013661m | 0.0 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18400.1 | 2e-46 | BR enhanced expression 1 |
Link Out ? help Back to Top | |
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Phytozome | Manes.02G068800.2.p |