PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.01G238400.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family NAC
Protein Properties Length: 517aa    MW: 58483.4 Da    PI: 6.6812
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.01G238400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM133.71.3e-4151343127
                  NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkya..tgkrknratksgyWkatgk 88 
                          +G+rFhPt+eelv+++Lk+k++g++  ++e i+ +d++k++PwdLp+  +  ++++ wyfF++r+ ky+  t +r nr+t+sg Wk tg+
  Manes.01G238400.1.p   5 VGYRFHPTEEELVDYFLKHKMNGHDSLVDEDIRFIDLCKFDPWDLPRyaAEVSNDQVWYFFCRREVKYKnaTRQRFNRSTQSGHWKPTGN 94 
                          7************************888888***************52322236779*********99933467889************* PP

                  NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                          +++++s+ +++++g+k+tLvfyk  +pk ++t+Wv+hey+
  Manes.01G238400.1.p  95 ERSIMSRsTNTEIGTKRTLVFYKRGTPKEVRTNWVIHEYQ 134
                          ******966778***************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100545.7033153IPR003441NAC domain
SuperFamilySSF1019413.66E-444152IPR003441NAC domain
PfamPF023651.6E-235134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    Send to blast
MSRRVGYRFH PTEEELVDYF LKHKMNGHDS LVDEDIRFID LCKFDPWDLP RYAAEVSNDQ  60
VWYFFCRREV KYKNATRQRF NRSTQSGHWK PTGNERSIMS RSTNTEIGTK RTLVFYKRGT  120
PKEVRTNWVI HEYQPKTLLP HQTDFVLCKL KEKRLDKARI SACDEGQSSR SGPSDNRPIE  180
IPISEVDSVQ LLESLLASTC GGPNFNPVSL MQPQMHIDQG ISIEDLISTD DYGNDSDRLW  240
EMEEDPNEMA YSFIVVPDEH SGEEYLYPIS GNPYGYNSEE GARINRNHSS SPNSMNGVYL  300
DEIRDMDFYE TPLQSGASNL NNGHYRQMQR VQAITETLPP STFDQSGSEK TGVLQMNISS  360
SSADSDIDSF EDISVRVVSK KLPVHTRTRK QLQPSCGNIK AEKGVTPKGS LIQGKLSGAS  420
EHKVKESRKH VAGRVQPQEN HKGSITVKTE QDQKTDFAKT KLRENAVATD NKTGSFIRLE  480
TSVLSQSSSP PSVYFINVLI GLVLFLAASR EVLILH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-26615418169Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.01G238400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021611052.10.0NAC domain-containing protein 91-like
TrEMBLA0A2C9WNK70.0A0A2C9WNK7_MANES; Uncharacterized protein
STRINGcassava4.1_008493m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14584713
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49530.17e-41NAC domain containing protein 62