PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.01G238300.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family NAC
Protein Properties Length: 514aa    MW: 58025.4 Da    PI: 7.2203
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.01G238300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM129.72.2e-40241523127
                  NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                          +GfrFhPtdee++ +yLk+k++gk+  ++++i e+d++++eP+d+p+   +++++k wyfF + d ky+++kr+nr+t++g+Wk tgk +
  Manes.01G238300.1.p  24 VGFRFHPTDEEIIGYYLKHKMNGKDSLVNHIIGEIDLCQCEPSDIPElcLISSNDKVWYFFNRPDYKYSNSKRANRMTRAGFWKITGKIR 113
                          7************************999899***************5457778999********************************** PP

                  NAM  91 evlsk.kgelvglkktLvfykg.rapkgektdWvmheyr 127
                           v++  +ge++g k++Lvfy++ +++k+ +t+Wv+hey+
  Manes.01G238300.1.p 114 YVKAGdTGEEIGSKRSLVFYSKvHDSKPLRTNWVIHEYQ 152
                          **99878899**********554999999*********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100543.77722171IPR003441NAC domain
SuperFamilySSF1019415.89E-4123171IPR003441NAC domain
PfamPF023658.0E-2324152IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    Send to blast
MDSHLDTHSV PDPIHEEIIT PPKVGFRFHP TDEEIIGYYL KHKMNGKDSL VNHIIGEIDL  60
CQCEPSDIPE LCLISSNDKV WYFFNRPDYK YSNSKRANRM TRAGFWKITG KIRYVKAGDT  120
GEEIGSKRSL VFYSKVHDSK PLRTNWVIHE YQSTNILAHQ SHFVLCKLKH KADEIIDHSP  180
PDEGEPIRPK DAEIENHAAQ VAADAEQVRQ SRICPAGMDP AGLKSQMHLK QGVSDEHSLR  240
TNCCDNLHKG LDLHYTSDDD VDPIKLADSF LALDEYSTEK YADVSSNACR LPKPLSRSDL  300
DTEDVGHTKR VRKYQLRQTV VTPSETQPFG QGMGDPYFVA VTGARAEGLS AATLDEVNHI  360
GLAYKPTANR GVAQFASLVS MDEALEFKEN CLSGQGQGPC YSPKQINCLE LVREEFPKRE  420
QSLKCRNFTE DELKSSRVSR VRNLSCRYKK RKPDLNLRSS GSSDNNWEFR PHSSSVYISS  480
SKHRPHSSSV YIVNAVVGLV LLIFIVREMQ IRH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-251717412171Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.01G238300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR6051770.0KR605177.1 Manihot esculenta NAC transcription factors 39 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021621455.10.0NAC domain-containing protein 7-like
TrEMBLA0A2C9WPW40.0A0A2C9WPW4_MANES; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14584713
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24590.25e-39TCV-interacting protein