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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.01G238100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | NAC | ||||||||
Protein Properties | Length: 68aa MW: 7766.57 Da PI: 4.6294 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 47.2 | 7.3e-15 | 22 | 68 | 1 | 48 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 lp+G rFhP+deelv++yLk+k +g++++ + i ev+i++++P+dLp Manes.01G238100.1.p 22 LPVGWRFHPSDEELVDHYLKRKRRGDPIDGLD-IGEVQICDYDPKDLP 68 799************************99955.**************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.42E-16 | 13 | 68 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 17.454 | 22 | 68 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.4E-7 | 23 | 46 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 68 aa Download sequence Send to blast |
MNNNSYSSYS SSGSPQFVPL NLPVGWRFHP SDEELVDHYL KRKRRGDPID GLDIGEVQIC 60 DYDPKDLP |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.01G238100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021635388.1 | 1e-24 | NAC domain-containing protein 69-like | ||||
TrEMBL | A0A2C9WR64 | 8e-43 | A0A2C9WR64_MANES; Uncharacterized protein (Fragment) | ||||
STRING | cassava4.1_028980m | 1e-43 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF11433 | 17 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04400.1 | 6e-13 | NAC domain containing protein 77 |
Link Out ? help Back to Top | |
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Phytozome | Manes.01G238100.1.p |