PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.01G193400.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family bHLH
Protein Properties Length: 268aa    MW: 29298.3 Da    PI: 5.7689
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.01G193400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.8e-11150197455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Manes.01G193400.1.p 150 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 197
                          8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.91E-11144201No hitNo description
SuperFamilySSF474595.89E-18144215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.1E-18146214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.828146196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.8E-8150197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-10152202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048446Biological Processpetal morphogenesis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MDPPAIMNDG SYNLAEIWQF PINGNGRGQF GQSLGSQFGD SNRDVSGNDP MNLEHRGARG  60
GGGAGVRKRR DFVEDDSAQV FSSSNANGNG MSDADAKRLK TSENRDENPD PKADAELSSG  120
KPVEQNAQPP EPPKQDYIHV RARRGQATDS HSLAERARRE KISERMKILQ DLVPGCNKVI  180
GKALVLDEII NYIQSLQRQV EFLSMKLEAV NSRMNPGIEA FPSKDFGQQT YDATGMAFGS  240
QATRDYSRGP SPEWLHMQVG GGFERPS*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00207DAPTransfer from AT1G59640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.01G193400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021616639.10.0transcription factor BHLH089-like
SwissprotQ69WS32e-83BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A2C9WPL10.0A0A2C9WPL1_MANES; Uncharacterized protein
STRINGcassava4.1_013977m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.18e-97BIG PETAL P