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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Manes.01G141500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family |
SRS |
Protein Properties |
Length: 341aa MW: 36337.1 Da PI: 7.6266 |
Description |
SRS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Manes.01G141500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF702 | 229.3 | 6.7e-71 | 108 | 257 | 3 | 154 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstkls 92
g++sCqdCGnqakkdC+h+RCRtCCksrgfdC+thvkstWvpa+krrerqqq aa+++++++++ + +++++l+++ +s+l++t+l+
Manes.01G141500.1.p 108 GGNISCQDCGNQAKKDCVHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQQFAALQQQQQQQQLQRCGENPKRLRENPSSSLACTRLP 197
5789***********************************************************999999999999999***********9 PP
DUF702 93 saeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
++ s le+ ++P+evss+avfrcvrvs++d++++++aYqtav+igGh+fkGiLyd+G+e+
Manes.01G141500.1.p 198 TNAS--GLEVGNFPAEVSSPAVFRCVRVSAIDENDDQCAYQTAVNIGGHLFKGILYDHGPES 257
9865..589999************************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MAGLFSLGGG GGGGGGGRGS NQEDQHNNPP TEIPQESWFW YKNEDIPYKG FELWQQQESL 60 RQRHQNTQQD LYSSAAGLGV GPSRSSINVS DESSSRSAFM MMRSSSGGGN ISCQDCGNQA 120 KKDCVHMRCR TCCKSRGFDC QTHVKSTWVP ASKRRERQQQ FAALQQQQQQ QQLQRCGENP 180 KRLRENPSSS LACTRLPTNA SGLEVGNFPA EVSSPAVFRC VRVSAIDEND DQCAYQTAVN 240 IGGHLFKGIL YDHGPESTYM PATETSSGGA SGEVQPLNLI RAGSTTASTA ISPTGAGGGV 300 MSASTSAAAA AAAFMDPSSL YPIPLNSFIA GTPFFQNPRS *
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM). {ECO:0000269|PubMed:12361963, ECO:0000269|PubMed:16740145, ECO:0000269|PubMed:16740146, ECO:0000269|PubMed:18811619, ECO:0000269|PubMed:20154152, ECO:0000269|PubMed:22318676}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Regulated by ESR1 and ESR2. {ECO:0000269|PubMed:21976484}. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G51060.1 | 1e-90 | Lateral root primordium (LRP) protein-related |