PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Manes.01G104200.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Family | bHLH | ||||||||
Protein Properties | Length: 304aa MW: 33858.6 Da PI: 5.8266 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 56.4 | 5.3e-18 | 26 | 75 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+e E+rRR++iN++f+ Lr+l+P++ ++K +Ka+ L +++eYI+ Lq Manes.01G104200.2.p 26 RSKHSETEQRRRSKINERFQVLRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 75 899*************************9....9*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 1.3E-23 | 23 | 98 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 17.295 | 24 | 74 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 7.98E-20 | 25 | 96 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.86E-18 | 26 | 79 | No hit | No description |
Pfam | PF00010 | 2.2E-15 | 26 | 75 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 9.8E-14 | 30 | 80 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence Send to blast |
MNLMITTPLL TEMDGKSSGQ KVNTHRSKHS ETEQRRRSKI NERFQVLRDL IPQNDQKRDK 60 ASFLLEVIEY IQFLQEKLQM YEGPYQGWSQ EPTKLTPWKN HNLPVEGAMD HSQASNNGSA 120 HKTTAMLTNL NNLIEPHLGT TAVPFNVQVQ SNMFAAVGRE DVIAQPVQES VSDAENMAYP 180 HQSQLWQGQP CATECGTLNN TSNGQDEPMI ETGSVGLSNT YSQGILYTLT EALRSSGVDL 240 TQTNISVQID VGKQGNRGAP FVASSSKDEE ILNFHNQVME QTGVRGRMED SDQAHKRPRT 300 EKS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Manes.01G104200.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021633935.1 | 0.0 | transcription factor BIM2-like isoform X2 | ||||
TrEMBL | A0A2C9WM58 | 0.0 | A0A2C9WM58_MANES; Uncharacterized protein | ||||
STRING | cassava4.1_011969m | 0.0 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69010.1 | 4e-60 | BES1-interacting Myc-like protein 2 |
Link Out ? help Back to Top | |
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Phytozome | Manes.01G104200.2.p |