PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.01G012200.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 309aa    MW: 35086.5 Da    PI: 4.9436
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.01G012200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.41.1e-15108157154
                  AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                          s ykGVr+++ +g++ AeIrd +     r  r +lg++ taeeAa+a+ + ++++e
  Manes.01G012200.1.p 108 SNYKGVRRRP-WGKFSAEIRDpF-----RkVRLWLGTYTTAEEAAAAYRKKKQEFE 157
                          57********.**********76.....45******************99998875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.42E-15108155IPR016177DNA-binding domain
PfamPF008472.5E-9108157IPR001471AP2/ERF domain
CDDcd000184.66E-13108137No hitNo description
SMARTSM003801.4E-15109179IPR001471AP2/ERF domain
PROSITE profilePS5103218.097109173IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.8E-20109152IPR001471AP2/ERF domain
PRINTSPR003672.2E-9110121IPR001471AP2/ERF domain
PRINTSPR003672.2E-9132148IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MPGLKRLILD QNLSFGKEEK KQPSHLLSTK KIRIICHDPE ATDSSSDEDE GQNERSNRLM  60
GSKLFVREIK ISLPPHESTA ENSSQENNTN RGKITSNSNQ KKTRILSSNY KGVRRRPWGK  120
FSAEIRDPFR KVRLWLGTYT TAEEAAAAYR KKKQEFEMMM EARKLKKLSI NTKLESEESS  180
GLFSYPSPSS VLDVPTRTSL SHGIEAPIKE ENNEEKTHEE ISELKMVEER QSVLDLWEEP  240
ALSPSISQEL LSGDYCSELG KFLNNVNNAE DFSMEVVDFF PMEGVMDLPD IELETLAFVE  300
ESLNFTCP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.01G012200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021618668.10.0ethylene-responsive transcription factor ERF117
RefseqXP_021618677.10.0ethylene-responsive transcription factor ERF117
RefseqXP_021618684.10.0ethylene-responsive transcription factor ERF117
TrEMBLA0A251LZR60.0A0A251LZR6_MANES; Uncharacterized protein
STRINGcassava4.1_014695m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134512027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-15cytokinin response factor 4