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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
MLOC_79967.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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| Family |
C2H2 |
| Protein Properties |
Length: 313aa MW: 33082.1 Da PI: 7.6919 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_79967.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 15.1 | 6.6e-05 | 5 | 26 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23
+C+ C ++F ++ L H+r+H
MLOC_79967.1 5 TCKLCFRRFASPRALAGHMRSH 26
6********************9 PP
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| 2 | zf-C2H2 | 11.7 | 0.00081 | 238 | 259 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23
+Cp+C ++F++ L H r+H
MLOC_79967.1 238 ECPYCYRVFPSGQALGGHKRSH 259
5******************999 PP
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| Protein Features
? help Back to Top |
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| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| PROSITE profile | PS50157 | 9.162 | 4 | 31 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.049 | 4 | 26 | IPR015880 | Zinc finger, C2H2-like |
| SuperFamily | SSF57667 | 5.25E-7 | 5 | 26 | No hit | No description |
| Pfam | PF13894 | 4.0E-4 | 5 | 26 | No hit | No description |
| PROSITE pattern | PS00028 | 0 | 6 | 26 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 5.25E-7 | 166 | 193 | No hit | No description |
| PROSITE profile | PS50157 | 9.078 | 171 | 193 | IPR007087 | Zinc finger, C2H2 |
| Pfam | PF13912 | 2.3E-9 | 171 | 193 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.28 | 171 | 193 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE pattern | PS00028 | 0 | 173 | 193 | IPR007087 | Zinc finger, C2H2 |
| Pfam | PF13912 | 2.5E-12 | 237 | 259 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 2.1 | 237 | 259 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE pattern | PS00028 | 0 | 239 | 259 | IPR007087 | Zinc finger, C2H2 |
| Sequence ? help Back to Top |
| Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MAKNTCKLCF RRFASPRALA GHMRSHSVRN LAAKQQISSA SSASTSFTAA ADDDISFKKP 60
LPIYALRENP KRSLRVTDVA FSDRESEAES TPPRAKRAHP TAAGGETEPL SSVSDAATPE 120
EDVALSLMML SRDSWPSSVG RGDGDYSDDG SDGGYTLPAP DPTPVEKRTR FQCGACKKVF 180
RSYQALGGHR ASHVRGGRGG CCAPPVAPPP PTPQPLPPLP LMERDGDEDM DGKGSPRECP 240
YCYRVFPSGQ ALGGHKRSHV CSAAAAAAQA HAAAAPPDPI KAFGMIDLNI ALPCEDVELS 300
AVSDPRFSSN PAP
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