 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_7939.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
Family |
WRKY |
Protein Properties |
Length: 400aa MW: 41993.8 Da PI: 7.0773 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_7939.1 | genome | IBSC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 93.7 | 1.4e-29 | 240 | 299 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+H h+
MLOC_7939.1 240 MNDGCQWRKYGQKISKGNPCPRAYYRCTVApSCPVRKQVQRCADDMSILITTYEGTHSHP 299
58***************************99****************************7 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006952 | Biological Process | defense response |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 400 aa
Download sequence Send
to blast |
MDVGVERPPP VKEENKPDTM QIGSALPMVL ESFPSTQRNS IATSKDDKLE ATKAEMGEVR 60 EENERLKTLL SHIVRDYQSL QTHFHDAVKV KQQAPAADKL PAASTPAPTA DDLVSLSLGS 120 GGYSRPKGAH QRSLSSSSSG TETDPDDQLS LGLSSRRSTD GDDRQAARPS ATPLMNLSSD 180 SSADDTAAPG HDLPAAACPT ATKARKSPGA GGDGADDEVL QQQAKKARVS VRVKCDTPTM 240 NDGCQWRKYG QKISKGNPCP RAYYRCTVAP SCPVRKQVQR CADDMSILIT TYEGTHSHPL 300 PPAAAAMAST TSAAASMLLA GSSSSSSHGH HLPFASAGLL GPTTISTIAS CPTVTLDLTA 360 PHSLMQQQYQ SPYAAAMAAG YESKALPAAW SSGYLAPYGG
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 224 | 233 | KKARVSVRVK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK368042 | 0.0 | AK368042.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2066P22. |