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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MLOC_78558.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family |
M-type_MADS |
Protein Properties |
Length: 168aa MW: 18806.5 Da PI: 9.3483 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_78558.1 | genome | IBSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 67.2 | 1.7e-21 | 22 | 64 | 5 | 47 |
SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
SRF-TF 5 nksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
+k rqvtfskRr+g++KK +ELS+LC+a+vav++fs+ g+++
MLOC_78558.1 22 DKNSRQVTFSKRRAGLFKKCSELSILCGARVAVVVFSEAGNVF 64
5788************************************985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 168 aa
Download sequence Send
to blast |
MVRPRGTTST GRHRIEMSLR PDKNSRQVTF SKRRAGLFKK CSELSILCGA RVAVVVFSEA 60 GNVFALGSPS MEAVLRLHDS APVPAADVDD REVLEEMFRA REATAEQVAS EVARMNSIAD 120 KVVKAQMGRR YWWEADVEAL GEDELPEFAR ALDRLRANVR RHADKLLP
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1tqe_P | 3e-15 | 11 | 99 | 2 | 90 | Myocyte-specific enhancer factor 2B |
1tqe_Q | 3e-15 | 11 | 99 | 2 | 90 | Myocyte-specific enhancer factor 2B |
1tqe_R | 3e-15 | 11 | 99 | 2 | 90 | Myocyte-specific enhancer factor 2B |
1tqe_S | 3e-15 | 11 | 99 | 2 | 90 | Myocyte-specific enhancer factor 2B |
6c9l_A | 3e-15 | 11 | 99 | 2 | 90 | Myocyte-specific enhancer factor 2B |
6c9l_B | 3e-15 | 11 | 99 | 2 | 90 | Myocyte-specific enhancer factor 2B |
6c9l_C | 3e-15 | 11 | 99 | 2 | 90 | Myocyte-specific enhancer factor 2B |
6c9l_D | 3e-15 | 11 | 99 | 2 | 90 | Myocyte-specific enhancer factor 2B |
6c9l_E | 3e-15 | 11 | 99 | 2 | 90 | Myocyte-specific enhancer factor 2B |
6c9l_F | 3e-15 | 11 | 99 | 2 | 90 | Myocyte-specific enhancer factor 2B |
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