 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MLOC_77955.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 198aa MW: 21518.2 Da PI: 9.0481 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_77955.2 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 58 | 1.6e-18 | 32 | 86 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Le+ F+++++++++++ LAk+l+L rqV vWFqNrRa+ k
MLOC_77955.2 32 RKKLRLSKEQAAFLEDSFKEHSTLNTKQKVALAKQLNLLPRQVEVWFQNRRARTK 86
788899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 125.3 | 2.8e-40 | 32 | 122 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
+kk+rlskeq+++LE+sF+e+++L++++Kv+la++L+l prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk
MLOC_77955.2 32 RKKLRLSKEQAAFLEDSFKEHSTLNTKQKVALAKQLNLLPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELR-ALK 122
69*************************************************************************************9.555 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 198 aa
Download sequence Send
to blast |
MDFSAQGDRD AAPAGGGGGS RGSDEDDGGS ARKKLRLSKE QAAFLEDSFK EHSTLNTKQK 60
VALAKQLNLL PRQVEVWFQN RRARTKLKQT EVDCEYLKRC CETLTEENRR LQKELAELRA 120
LKSVHPFYMH LPATTLSMCP SCERVASNSA PAPSPAGIAA APEQQHRPSS FAALFSSARS 180
FPLASSPSQA PMPAPSSS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT036447 | 1e-162 | BT036447.1 Zea mays full-length cDNA clone ZM_BFb0114O05 mRNA, complete cds. |
| GenBank | KJ726911 | 1e-162 | KJ726911.1 Zea mays clone pUT3456 HB transcription factor (HB11) mRNA, partial cds. |
