 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MLOC_7757.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
NAC |
| Protein Properties |
Length: 268aa MW: 29759 Da PI: 6.9424 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_7757.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 136.5 | 1.7e-42 | 4 | 136 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppG+rF Pt+eelv +yL++ ++g++ ++e+vi+ +d+++++Pw+Lp+ +++++ + w++F+ r++++a+g r++r+t sgyWka g+ v+
MLOC_7757.1 4 LPPGYRFYPTEEELVRFYLRHMLDGSRrDDIERVIPVADVCSLDPWQLPEvhrgACAGHGEPWFYFCARQEREARGGRPSRTTPSGYWKAAGTPGLVY 101
79**********************9996677788**************95456544557889************************************ PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
s++g+ vg+kkt+vfy+grap g kt+W m+eyr+
MLOC_7757.1 102 SAGGHPVGTKKTMVFYRGRAPAGAKTKWKMNEYRA 136
*********************************95 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MAELPPGYRF YPTEEELVRF YLRHMLDGSR RDDIERVIPV ADVCSLDPWQ LPEVHRGACA 60
GHGEPWFYFC ARQEREARGG RPSRTTPSGY WKAAGTPGLV YSAGGHPVGT KKTMVFYRGR 120
APAGAKTKWK MNEYRAFDDD GTHADAAAPA PNTTLEVRSE FSLCRLYTRS GSLRQFDRRP 180
CTAVAGSGAE DPASSSAAAA SANEVFEMGR GQKRKRHAAN DHAPSNGDAY RSVVQQQQQQ 240
EVVGGADEQL TADDMTDWAE LLHWIEYK
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 6e-30 | 4 | 172 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 6e-30 | 4 | 172 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 6e-30 | 4 | 172 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 6e-30 | 4 | 172 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 7e-30 | 4 | 172 | 20 | 171 | NAC domain-containing protein 19 |
| 3swm_B | 7e-30 | 4 | 172 | 20 | 171 | NAC domain-containing protein 19 |
| 3swm_C | 7e-30 | 4 | 172 | 20 | 171 | NAC domain-containing protein 19 |
| 3swm_D | 7e-30 | 4 | 172 | 20 | 171 | NAC domain-containing protein 19 |
| 3swp_A | 7e-30 | 4 | 172 | 20 | 171 | NAC domain-containing protein 19 |
| 3swp_B | 7e-30 | 4 | 172 | 20 | 171 | NAC domain-containing protein 19 |
| 3swp_C | 7e-30 | 4 | 172 | 20 | 171 | NAC domain-containing protein 19 |
| 3swp_D | 7e-30 | 4 | 172 | 20 | 171 | NAC domain-containing protein 19 |
| 4dul_A | 6e-30 | 4 | 172 | 17 | 168 | NAC domain-containing protein 19 |
| 4dul_B | 6e-30 | 4 | 172 | 17 | 168 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK359954 | 0.0 | AK359954.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1107F05. |
