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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_7605.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family |
C2H2 |
Protein Properties |
Length: 176aa MW: 18001.1 Da PI: 8.2698 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_7605.1 | genome | IBSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 13.6 | 0.0002 | 66 | 88 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C + F ++ L H++ H
MLOC_7605.1 66 FSCNYCQRKFFSSQALGGHQNAH 88
89*****************9988 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 176 aa
Download sequence Send
to blast |
MQRPAMEGEA AQPQSNQLLL HGVSLDLRLD TATATHQQGQ RGARRPASPA APPPAAALDN 60 AGREAFSCNY CQRKFFSSQA LGGHQNAHKL ERTLAKRSRD VPSATASASS SAAAHWLHAG 120 GGELWGYSAS GAAPDSATMA PLMGMGMGMG MGWGGTGSTA AAGGEAVAEM DLSLKL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC137592 | 2e-43 | AC137592.2 Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0035B22, complete sequence. |
GenBank | AP005090 | 2e-43 | AP005090.3 Oryza sativa Japonica Group genomic DNA, chromosome 9, BAC clone:OJ1065_E04. |
GenBank | AP014965 | 2e-43 | AP014965.1 Oryza sativa Japonica Group DNA, chromosome 9, cultivar: Nipponbare, complete sequence. |
GenBank | CP012617 | 2e-43 | CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence. |