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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_74758.3 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
WOX |
| Protein Properties |
Length: 96aa MW: 10987.4 Da PI: 10.693 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_74758.3 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 66.5 | 3.4e-21 | 11 | 72 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++ R+++t+eq+++L elF+ r+ps+e++++++++l +++ ++V++WFqN++a+e++
MLOC_74758.3 11 KCGRWNPTAEQVKVLTELFRAgLRTPSTEQIQRISTHLsalgKVESKNVFYWFQNHKARERH 72
568*****************99**************************************95 PP
|
| 2 | Wus_type_Homeobox | 110 | 1.3e-35 | 12 | 73 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
+ RW+Pt+eQ+k+L+el+++GlrtP++e+iqri+++L++ Gk+e+kNVfyWFQN+kaRer++
MLOC_74758.3 12 CGRWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSALGKVESKNVFYWFQNHKARERHH 73
78**********************************************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009733 | Biological Process | response to auxin |
| GO:0010078 | Biological Process | maintenance of root meristem identity |
| GO:1902459 | Biological Process | positive regulation of stem cell population maintenance |
| GO:0016787 | Molecular Function | hydrolase activity |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor which may be involved in the specification and maintenance of the stem cells (QC cells) in the root apical meristem (RAM). {ECO:0000269|PubMed:12904206}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK370947 | 1e-160 | AK370947.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2120M06. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Li S, et al.
OsFIE2 plays an essential role in the regulation of rice vegetative and reproductive development.
New Phytol., 2014. 201(1): p. 66-79
[PMID:24020752] - Chu H, et al.
A CLE-WOX signalling module regulates root meristem maintenance and vascular tissue development in rice.
J. Exp. Bot., 2013. 64(17): p. 5359-69
[PMID:24043854] - Wang W, et al.
Dwarf Tiller1, a Wuschel-related homeobox transcription factor, is required for tiller growth in rice.
PLoS Genet., 2014. 10(3): p. e1004154
[PMID:24625559] - Coudert Y, et al.
Identification of CROWN ROOTLESS1-regulated genes in rice reveals specific and conserved elements of postembryonic root formation.
New Phytol., 2015. 206(1): p. 243-54
[PMID:25442012]
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