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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_7325.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family |
AP2 |
Protein Properties |
Length: 355aa MW: 39534.5 Da PI: 8.9677 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_7325.1 | genome | IBSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53.4 | 6.5e-17 | 11 | 70 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g
MLOC_7325.1 11 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 70
57*******************766644468557*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MTPCAAGKRS SIYRGVTRHR WTGRYEAHLW DKSTWNQNQN KKGKQVYLGA YDDEEAAARA 60 YDLAALKYWG AGTQINFPVS DYTRDLEEMQ MISKEDYLVS LRRKSSAFSR GLPKYRGLPR 120 QLHNSRWDAS LGQLLGNDYM NLSCGKGIAL DGKFAGSFGL ERKIDLTNYI RWWVPKKARQ 180 SDTSKAEEVA DEIRAIEGSV QLTEPYKLPS LGLGSHSKPS SAGLSACGIL SQSGAFKSFL 240 EKSTKLSEEC TFSKEIDEGK VAVSEPTTGH HTSAVDINMN GLLVQRAPYT LAPVMPTMKS 300 TWSPSDPSAD HLFWSNFILP SSQPVTMATI TTTTFAKNEV SSSDPFKNQE YEHTK
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK355749 | 0.0 | AK355749.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1025C06. |