 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_72737.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
NAC |
| Protein Properties |
Length: 217aa MW: 24441.8 Da PI: 9.4137 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_72737.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 174.5 | 3e-54 | 17 | 146 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95
lppGfrFhPtdee+++ yL++kv + +e+ ++i evd++k ePw+Lpkk+k +++ewyf++++d+ky+tg r+nratk gyWkatgkdke+++
MLOC_72737.1 17 LPPGFRFHPTDEEIITSYLAPKVLNPAFEA-TAIGEVDMNKNEPWELPKKAKMGQNEWYFYCQKDRKYPTGIRTNRATKVGYWKATGKDKEIFNPhc 112
79**************************99.88***************99999*****************************************987 PP
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
++ l+g+kktLvfykgrap+gekt+Wvmheyrle
MLOC_72737.1 113 TSMLIGMKKTLVFYKGRAPSGEKTNWVMHEYRLE 146
8888****************************85 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 217 aa
Download sequence Send
to blast |
MAGHLQVQQQ QQQQLELPPG FRFHPTDEEI ITSYLAPKVL NPAFEATAIG EVDMNKNEPW 60
ELPKKAKMGQ NEWYFYCQKD RKYPTGIRTN RATKVGYWKA TGKDKEIFNP HCTSMLIGMK 120
KTLVFYKGRA PSGEKTNWVM HEYRLEISKQ STSGLPTSIA NAAAINMSSK EYVVCRIFQK 180
NTGSGPSSMV SYEDVGTGPS NNDQSNRGAT DGMLKYL
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 7e-50 | 4 | 184 | 3 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 7e-50 | 4 | 184 | 3 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 7e-50 | 4 | 184 | 3 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 7e-50 | 4 | 184 | 3 | 169 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 7e-50 | 4 | 184 | 3 | 169 | NAC domain-containing protein 19 |
| 4dul_B | 7e-50 | 4 | 184 | 3 | 169 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FR819764 | 0.0 | FR819764.1 Hordeum vulgare subsp. vulgare mRNA for NAC transcription factor (NAC019 gene). |
