 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MLOC_72623.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
C2H2 |
| Protein Properties |
Length: 386aa MW: 41907.7 Da PI: 8.5088 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_72623.2 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 11.8 | 0.00077 | 356 | 379 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
++C+ C++ Fs+ L H ++ H
MLOC_72623.2 356 HVCNSCNRAFSSLKGLDDHSKMkH 379
79*****************99888 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 386 aa
Download sequence Send
to blast |
MTENHRFWGV VVKPGETVKC DPGDSHYHIS TIALEAGKAE ENVQVFVNTD DTRIMLGTLS 60
VHNHPHVLAD LVFKKEFELL HSSMTSNISF TGYKFDIMKR SHSCTKQGDE SDEEVPMAIP 120
LDFNTDANKN NEIAHDANKL IAPRPADAPS SIPEATVEET NTPGKQKADD KGKANAQNPI 180
DGADNESSDQ DVDYLRKKTK DDYNPMETPL NTPQGKRAKI ATPTTGNKTG YVHVATPHPA 240
AKQACKSVDH VHVVTPHPAV KQARKSGDRV HVVTPHPAAK QSHKSGDHVH VATPHPAAKQ 300
ARKSGDHFHV ATPHPAAKQA RKSGDHVHVA TPHPAAKHAR KTPENSDDKS KQSAGHVCNS 360
CNRAFSSLKG LDDHSKMKHG VASKVA
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | EU348776 | 0.0 | EU348776.1 Hordeum vulgare cultivar Caresse histone deacetylase HD2 isoform 2 mRNA, complete cds. |
