 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_72525.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
LBD |
| Protein Properties |
Length: 170aa MW: 17907.3 Da PI: 8.5906 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_72525.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 138.9 | 1.7e-43 | 38 | 136 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97
+CaaCk+lrrkC++dCv+apyfp ++p+kf vh++FGasnv+kll++l++ +reda++sl+yeA++r+rdPvyG+v+vi+ lq++l+ql+++la++
MLOC_72525.1 38 PCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAVISILQRNLRQLQQDLARA 134
7*********************************************************************************************998 PP
DUF260 98 ke 99
k
MLOC_72525.1 135 KY 136
76 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009799 | Biological Process | specification of symmetry |
| GO:0009944 | Biological Process | polarity specification of adaxial/abaxial axis |
| GO:0009954 | Biological Process | proximal/distal pattern formation |
| GO:0048441 | Biological Process | petal development |
| GO:0005654 | Cellular Component | nucleoplasm |
| Sequence ? help Back to Top |
| Protein Sequence Length: 170 aa
Download sequence Send
to blast |
MASSSASSLP APGGSVITLA ASSAGGNGAG GVCGTGSPCA ACKFLRRKCQ PDCVFAPYFP 60
PDNPQKFVHV HRVFGASNVT KLLNELHPYQ REDAVNSLAY EADMRLRDPV YGCVAVISIL 120
QRNLRQLQQD LARAKYELSK YQSAAGPNGS QAMAEFIGSA VPNGVASFIN
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Promotes the switch from proliferation to differentiation in the embryo sac. Negative regulator of cell proliferation in the adaxial side of leaves. Regulates the formation of a symmetric lamina and the establishment of venation. Interacts directly with RS2 (rough sheath 2) to repress some knox homeobox genes. {ECO:0000269|PubMed:17209126}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK373607 | 0.0 | AK373607.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3036G24. |
