|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MLOC_71592.2 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
Family |
bHLH |
Protein Properties |
Length: 341aa MW: 37140.7 Da PI: 5.848 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_71592.2 | genome | IBSC | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 52.2 | 1.1e-16 | 240 | 287 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+ hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq
MLOC_71592.2 240 QVHNLSERRRRDRINEKMRALQELVPHC-----NKTDKASMLDEAIEYLKSLQ 287
56*************************8.....6******************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MNQQFVPADW SGNMGDALPP LSGEDGGLVE LLRCSGHVVM QSQAVRELEA TPWFQYPIDD 60 SLEEKDLFSE IFGRMPADGA GTPWKEEDQE RGAADAVTAL RSVLMPPPLL LTDKAGLHGH 120 GPPVSEAGES SVVTMAFGRP CGGSNEAQTP HVSDAAGDDR VLLPLSSKEA RDARSYHSAS 180 ATLTTSSAWS RPSGASKRKQ CDGAESPGEV MQHDVESESA NVTCETAQKP ATAKRRRAAQ 240 VHNLSERRRR DRINEKMRAL QELVPHCNKT DKASMLDEAI EYLKSLQLQL QVMWAMGGRM 300 APAPVMFPAG AHQYMQRMAT ISSKMPPFRT CVYSSNYPES S
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 234 | 249 | RRRAAQVHNLSERRRR |
2 | 245 | 250 | ERRRRD |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK360963 | 0.0 | AK360963.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1129K08. |