 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_71555.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 317aa MW: 35067.7 Da PI: 4.632 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_71555.2 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.2 | 1.6e-19 | 65 | 116 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++ eq+++Le+ Fe +++++ e+++++A+ lgL rqV vWFqNrRa++k
MLOC_71555.2 65 RRLALEQVRALERSFETDNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 116
467789*********************************************9 PP
|
| 2 | HD-ZIP_I/II | 128.9 | 2.1e-41 | 63 | 154 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
kkrrl+ eqv++LE+sFe+++kL+perK+++ar+Lgl+prqvavWFqnrRAR+ktkqlE+d++aL++++dal+++ ++L++++++L++e++e
MLOC_71555.2 63 KKRRLALEQVRALERSFETDNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERDFNALRARHDALRADCDALRRDKDALAAEIHE 154
9**************************************************************************************99986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009637 | Biological Process | response to blue light |
| GO:0030308 | Biological Process | negative regulation of cell growth |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
| GO:0048573 | Biological Process | photoperiodism, flowering |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 317 aa
Download sequence Send
to blast |
MKRQIKRPAG SKESPEPGEK LAFAEKENLL AAYMDHEEPE LEEADEEEEE EEERAMSCGL 60
GGKKRRLALE QVRALERSFE TDNKLDPERK ARIARDLGLH PRQVAVWFQN RRARWKTKQL 120
ERDFNALRAR HDALRADCDA LRRDKDALAA EIHELREKLS TKPETAVKAE ATGNVEAAEE 180
RLQQATMVGA AVCKDGSSDS DSSAVFNDEA SPYSGAVFEQ QGFMGFGASF LDTASAAAAT 240
TGCTSLPMLE PKWPSAYPYD ASRSSAYGFT EEWLSGSDAI GNDGSSAFFS EEHVSNLNFG 300
WCSSGAEGFD LQSYCKK
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 110 | 118 | RRARWKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK353965 | 0.0 | AK353965.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1004B20. |
