 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MLOC_71477.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
WRKY |
| Protein Properties |
Length: 340aa MW: 36775.1 Da PI: 7.0956 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_71477.2 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 98.7 | 3.7e-31 | 182 | 240 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++++itY+++Hnh+
MLOC_71477.2 182 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRTDPNMLVITYTSDHNHP 240
699************************998****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 340 aa
Download sequence Send
to blast |
MCDLFWLSPG EQGDLSDVVR ASLHRPHQLP TPAADEEEEE YSSLLREGGS GGDGLVVGHG 60
HGDEQLGMVA MMMGGNTRLP SSDHHVISLH SPPATTYTRP HPEPLAGMIR RPGIGREGEM 120
VVAPPPEIGE RLQHMSIVHH PRVPAAMKPR KSQSKKVVCI PAPTAAPGAS GRHSTSGEVV 180
PSDLWAWRKY GQKPIKGSPY PRGYYRCSSS KGCPARKQVE RSRTDPNMLV ITYTSDHNHP 240
WPTQRNALAG STRPSSSSAA RIAASSSSSS LAATAARNSS NTNVDVDCAG VHHQLKQESD 300
LDLFADMDAL NVFSSINKIQ EDDSKQQLFD PFSSGFCDYI
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC018727 | 1e-76 | AC018727.10 Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence. |
| GenBank | AP014966 | 1e-76 | AP014966.1 Oryza sativa Japonica Group DNA, chromosome 10, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012618 | 1e-76 | CP012618.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 10 sequence. |
| GenBank | KC954610 | 1e-76 | KC954610.1 Oryza sativa Japonica Group cultivar Dongjin WRKY2 mRNA, complete cds. |
