 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MLOC_70676.4 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
YABBY |
| Protein Properties |
Length: 187aa MW: 21185.2 Da PI: 9.2332 |
| Description |
YABBY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_70676.4 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | YABBY | 231.8 | 1.7e-71 | 6 | 162 | 5 | 170 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasq.llaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100
+e+vCyv+CnfCntilavsvPs+s++++vtvrCGhCtsllsvnl+ q l++++h +e+ k ++ +++ n+ + ++s+++ ++
MLOC_70676.4 6 APPEHVCYVHCNFCNTILAVSVPSNSMLNMVTVRCGHCTSLLSVNLRGLIQsPLPVQDH--------SQENFKAQNISFHGNYPDYGTSSKYRMPMM 94
679*******************************************9987515888887........788899999999999999998888877766 PP
YABBY 101 l.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
+ +++++e++ ++ p PekrqrvPsaynrfikeei+rika+nPdishreafs+aaknWahfP+ihfgl
MLOC_70676.4 95 FsTKSDQEHMLHMRP---APEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHFPNIHFGL 162
634556667777655...6**************************************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009944 | Biological Process | polarity specification of adaxial/abaxial axis |
| GO:1902183 | Biological Process | regulation of shoot apical meristem development |
| GO:2000024 | Biological Process | regulation of leaf development |
| Sequence ? help Back to Top |
| Protein Sequence Length: 187 aa
Download sequence Send
to blast |
MSAQIAPPEH VCYVHCNFCN TILAVSVPSN SMLNMVTVRC GHCTSLLSVN LRGLIQSPLP 60
VQDHSQENFK AQNISFHGNY PDYGTSSKYR MPMMFSTKSD QEHMLHMRPA PEKRQRVPSA 120
YNRFIKEEIR RIKANNPDIS HREAFSTAAK NWAHFPNIHF GLGSNESSKK LDETIATPIP 180
QKVQGLY
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK358221 | 0.0 | AK358221.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1071G06. |
