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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_70258.3 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family |
bHLH |
Protein Properties |
Length: 378aa MW: 40991.2 Da PI: 5.629 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_70258.3 | genome | IBSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 40 | 7.1e-13 | 213 | 258 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h + Er+RR+++N++f+ Lr+llP++ K +K ++L+kA Y+k L+
MLOC_70258.3 213 HMMSERKRREKLNDSFHALRSLLPPC-----SKKDKTTVLTKAAGYLKTLE 258
7789*********************9.....699**************985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 378 aa
Download sequence Send
to blast |
MDDVWCSLDM AADIAGLHSA LADPFWPADL DLMVSTDEVE GMADMDASGI YVGGGDDRFM 60 LPSSTTSSLS SKRSLSQDSG GSSGSGSFTL DLADASRYQA PAPPAPHNPL AGAADHDDEA 120 IMRAMMAVMS SSSASPSSSA SSHPQPFCRD RDSSMQQQPT AMAPQLRGGG PSGHVMVKSS 180 LSMSPERSSS GGRGQQQEDP TRAASNNTGQ LYHMMSERKR REKLNDSFHA LRSLLPPCSK 240 KDKTTVLTKA AGYLKTLEAQ VSDLEEKNSK LEKHIPSSDS EEDVPHQQRR QRAKVQITKA 300 ASSDEVVNLT VMVMVECDVV ELVLRILECL RWMEQVSVMS VDADTYSPQV LLKAIASIKL 360 RIMVRARAWI SFVSRFVF
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 216 | 221 | ERKRRE |
2 | 217 | 222 | RKRREK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK368684 | 0.0 | AK368684.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2078B02. |