 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_68844.5 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
Dof |
| Protein Properties |
Length: 365aa MW: 36828.8 Da PI: 8.6563 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_68844.5 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 125 | 2.4e-39 | 63 | 124 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
keka++cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss
MLOC_68844.5 63 KEKAINCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 124
7899******************************************************9875 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009639 | Biological Process | response to red or far red light |
| GO:0009845 | Biological Process | seed germination |
| GO:0005634 | Cellular Component | nucleus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 365 aa
Download sequence Send
to blast |
MEEMLMGAPS ANQVQGSNPN APAQAPSSAP GAAGAMRGAP PAMAVAVSGV GAGSTERRPR 60
PQKEKAINCP RCNSTNTKFC YYNNYSLQQP RYFCKTCRRY WTEGGSLRNV PVGGGSRKNK 120
RSSSSSSASA SAAASATASA ANSSMLGAAP NKNPKLAHEG AAHDLNLAFP HHQGGMQAQA 180
DYMAFPSLES SSMCNPGGGG MAGNGARASG ALSAMELLRS TGCYMPLQMP MQMPGDYGAA 240
GFSLGEFRAP PPPPQSQSQS LMGFSLDAHG PVGGASSAGY GSSAAMQGMQ DRASRLLFAF 300
EDLKPTASSG GAGGGESGGG SGGAADGGGH QFEQGNKEQQ GNGTPVGQPD TPGFWNGMIG 360
GGGTW
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 308 | 320 | SGGAGGGESGGGS |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that may transactivate seed storage protein genes in developing seeds. {ECO:0000250|UniProtKB:Q6K537}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK372117 | 0.0 | AK372117.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2146K16. |
| GenBank | AK375958 | 0.0 | AK375958.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3111B19. |
| GenBank | AM084350 | 0.0 | AM084350.1 Hordeum vulgare subsp. vulgare dof2 gene for dof zinc finger protein 2, exons 1-2. |
