 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
MLOC_6786.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
Family |
MYB |
Protein Properties |
Length: 270aa MW: 30175.5 Da PI: 6.6052 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_6786.1 | genome | IBSC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 52.7 | 9.5e-17 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT++Ed+ll+ +v+q G g+W+++a+ g++R++k+c++rw +yl
MLOC_6786.1 15 KGPWTAQEDKLLLGYVRQQGEGRWNSVAKLTGLKRSGKSCRLRWVNYL 62
79********************************************97 PP
|
2 | Myb_DNA-binding | 51.6 | 2.2e-16 | 68 | 112 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg+ T++E+ ++++++++G++ W+tIar ++ gRt++++k++w+++
MLOC_6786.1 68 RGKITPQEENVILELHALWGNR-WSTIARSLP-GRTDNEIKNYWRTH 112
8999******************.*********.************97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 270 aa
Download sequence Send
to blast |
MEQLGWGREE GGWRKGPWTA QEDKLLLGYV RQQGEGRWNS VAKLTGLKRS GKSCRLRWVN 60 YLRPDLKRGK ITPQEENVIL ELHALWGNRW STIARSLPGR TDNEIKNYWR THFKKGKPSS 120 KNIERARARF LKQRREIMQG QHEHQHQRGV QDDDGAASAD NTGGGAASHH ADEATTRPAP 180 PPAKDDDLAM MQDMADIDDF LQYHHPMSAY FLLDGGTSDA GSSEEINTCG ATWGSLWNLD 240 DVDVVDDVGG GGACGWGSFA LLQDQGLAFY
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK099283 | 1e-131 | AK099283.1 Oryza sativa Japonica Group cDNA clone:J023132O17, full insert sequence. |
GenBank | AK111807 | 1e-131 | AK111807.1 Oryza sativa Japonica Group cDNA clone:J013104N22, full insert sequence. |