PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_67369.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | bHLH | ||||||||
Protein Properties | Length: 329aa MW: 35637.4 Da PI: 6.0488 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.2 | 9.3e-11 | 254 | 294 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++RR++iN+++ L+ l+P+ +K++ +++Le+Av+YIk +q MLOC_67369.2 254 QKRREKINERLKVLQHLIPNG-----TKVDISTMLEEAVHYIKFMQ 294 89*****************97.....8****************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.129 | 244 | 293 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.7E-10 | 249 | 299 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.49E-12 | 253 | 307 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.2E-11 | 254 | 303 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 5.3E-8 | 254 | 294 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.02E-11 | 254 | 298 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence Send to blast |
MESSEASWHS FDPSVAVEDS EEMARLLGVQ FFGNEQKQHP AAVPPSSMYW PGQEAADQYY 60 TSAPYYMQMQ EHASAGAGYH SHGYYDGGAM AGDFFVAPEE QIMADPAGFM VDLNLQFDDQ 120 DDGAGTSAAA CKRKFGDQNG TQSDTVAAPK KKARSTAPPV QRKGKSSAQP KKAPKGSCSR 180 GAHEESNGEA NNNNVPSSSN YLSDEEGSLE MTSCSNMSSA SKKTSSSRGD HGGGAKARAG 240 RGAATDPQSL YARQKRREKI NERLKVLQHL IPNGTKVDIS TMLEEAVHYI KFMQLQIKLL 300 SSDDMWMFAP IAYNGFNVGL DLKIAPPQQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 148 | 154 | PKKKARS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | MLOC_67369.2 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020163011.1 | 1e-167 | transcription factor bHLH85-like | ||||
TrEMBL | M0YAS8 | 0.0 | M0YAS8_HORVV; Uncharacterized protein | ||||
STRING | MLOC_67369.2 | 0.0 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP11680 | 28 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14760.1 | 4e-45 | bHLH family protein |