 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_66539.7 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
Nin-like |
| Protein Properties |
Length: 265aa MW: 29199.7 Da PI: 5.9033 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_66539.7 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 24.8 | 4.5e-08 | 230 | 255 | 1 | 26 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLg 26
aek+isle+l++yFs+++k+AAk+Lg
MLOC_66539.7 230 AEKTISLEVLQQYFSGSLKNAAKSLG 255
589**********************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MGEVCMSTSD VAFHVIDAHM WGFRDACVEH HLQKGQGVSG KAFIYHRPCF SKDISQFCKL 60
EYPLVHYARM FGLAGCFAIC LQSPYTGDDY YMLEFFLPPS CKDEDDQNAL LESILGLINQ 120
CLRNLKVAGN GESNEASLQL SNVIRIENED FKTVHFENSE GFHESPEGDT HGGAHEFDKG 180
NSKVSEGHLL ADDNSQNNGT SVSRPNGSAA SDSSLLHKNS KPPERRRGKA EKTISLEVLQ 240
QYFSGSLKNA AKSLGGTLLI FTLLS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HE996522 | 0.0 | HE996522.1 Triticum aestivum cv. Arina SNP, chromosome 3B, clone Taes_arina_ctg_58235. |
| GenBank | HG670306 | 0.0 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
