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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
MLOC_65953.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family |
bHLH |
Protein Properties |
Length: 525aa MW: 55558.5 Da PI: 7.9783 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
MLOC_65953.1 | genome | IBSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 37.8 | 3.5e-12 | 328 | 373 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
h + ErrRR+r+N++f++Lr llP+ K +Ka +L ++eY+ +L
MLOC_65953.1 328 HHVISERRRRERLNDSFQTLRALLPPG-----SKKDKANVLASTTEYMAKL 373
58899********************95.....599************9876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 525 aa
Download sequence Send
to blast |
MDSVFALAAV PRALVLERAA ARVPGCLYLC LWAPVTAQLP SSHLFCLDAW IAGGGGGARA 60 RAGFEAYRGA LCAVVSGCVP GWAYREGRAY MELPEPDLTS SASLQVQQQF YHEAGTKMAV 120 FMGCESGEIE IGLSTTSVAA AAVADHVHQS FLEDLLQLPP AGLSSSSSPV PSLSIGSPEY 180 SSLIRAMATP AATAGEPSTQ PLLMHASSLP GLLAPIVEAN DYALMAQAML AAIPSPGAST 240 TSTPPPPPCP PWLASHRSQR SSPRRTTAFK PYRAALSPRA RPRPGAPGQR MIKTCMSLLA 300 SVHMSMRNQP ELAGAHHEPP PSSTSQLHHV ISERRRRERL NDSFQTLRAL LPPGSKKDKA 360 NVLASTTEYM AKLVSQVTQL RERNLQLEAE LGLNPSASDI NNPSGKTVEV EVTTGASTST 420 STSSTTPSQQ PREVGVRVTV RAECDMSDML VSLLARLKDA GGFMVVAAEA RQQSSALARA 480 SLTLRMTEAG DVVDATRLEE ALTKVVEDAV MKTPPPPVVP PPRSP
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK361666 | 0.0 | AK361666.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1146D10. |