 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_64879.2 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
Trihelix |
| Protein Properties |
Length: 342aa MW: 36622.9 Da PI: 6.1946 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_64879.2 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 83.9 | 2.1e-26 | 22 | 110 | 1 | 82 |
trihelix 1 rWtkqevlaLiearremeerlr.rgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82
rWt+qe+l+Lie++r +e r r rg+ ++ ++W++v++++r++g+er+p+qC+++w+nl+++ykki+e+e++ s + ++++ f
MLOC_64879.2 22 RWTRQEILVLIEGKRVVEVRGRgRGRgaaggaaAEPTKWAAVAEYCRRHGVERGPVQCRKRWSNLAGDYKKIREWERSLPSLAGKEVS-F 110
8*****************99995332345555599******************************************98766665443.3 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 342 aa
Download sequence Send
to blast |
MSSAGDPGGG IAGPGRAARL PRWTRQEILV LIEGKRVVEV RGRGRGRGAA GGAAAEPTKW 60
AAVAEYCRRH GVERGPVQCR KRWSNLAGDY KKIREWERSL PSLAGKEVSF WAMRNDARRE 120
RRLPGFFDRE VYDIIEGRGS GGGGIRDGGS NAAAVLAEVG EEEGKEKVVF DSGRASVAGD 180
DGLFSSSSSS EEEDEETSTP APVPVLPTAP YPSPSQAPAV VAVAVPVSLP EKKTEAPTQG 240
SSDQAGTSKG KQQEEIRITD EPPPPQGGQK RQRSDDALGE TTDLQGKLIE ILDRSGRMVA 300
AQLESQNINC QLDREQRKDQ VSSLLGVLGK VADALYRIAD KL
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK367735 | 0.0 | AK367735.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2061F21. |
