 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
MLOC_64817.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
MYB |
| Protein Properties |
Length: 424aa MW: 44704.7 Da PI: 9.864 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_64817.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 55.4 | 1.4e-17 | 116 | 161 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEd+ l ++v ++G ++W++I++ ++ gR++k+c++rw +
MLOC_64817.1 116 KGPWSPEEDDALQRLVGRHGARNWSLISKSIP-GRSGKSCRLRWCNQ 161
79******************************.***********985 PP
|
| 2 | Myb_DNA-binding | 51.4 | 2.6e-16 | 170 | 212 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++T++Ed+ +++a++++G++ W+tIar + gRt++ +k++w++
MLOC_64817.1 170 PFTPDEDDTILRAHARFGNK-WATIARLLS-GRTDNAIKNHWNST 212
89******************.*********.***********986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0009753 | Biological Process | response to jasmonic acid |
| GO:0010200 | Biological Process | response to chitin |
| GO:0046686 | Biological Process | response to cadmium ion |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 424 aa
Download sequence Send
to blast |
MVATPRVPGP AVPTSPPSLP CWAGTRSPSP PVPGIYPPPA PSAPLTPSFL CLLPSSLHFS 60
TAPPPPHYFG NPPPVAGSGY YAHVHPSIDR SIYGRRVMAA CRGGGGGGGK DVDRIKGPWS 120
PEEDDALQRL VGRHGARNWS LISKSIPGRS GKSCRLRWCN QLSPQVEHRP FTPDEDDTIL 180
RAHARFGNKW ATIARLLSGR TDNAIKNHWN STLKRKYSSS SSASASASAS ASPGDDAVDD 240
DRRPLKRTSS DGYPGLCFSP GSPSGSDLSD SSHQSLPSVM PSAASHQPHV YRPVARAGGV 300
VVLPTATPQP SPPSPPPPPP PPPPATSLSL SLSLPGLDAP EPAPVAQPMP MPMPPPPVPA 360
PVQPAAAPQM PPPSMPFHLQ PPPPPQPRAA APFNGEFLSM MQEMIRIEVR NYMSGFHPRS 420
PTSA
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 101 | 109 | RGGGGGGGK |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK355241 | 0.0 | AK355241.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1018A13. |
